Q9Z142 has 247 amino acids
Query: TMEM33_Pom33 [M=240]
Accession: PF03661.17
Description: Transmembrane protein 33/Nucleoporin POM33
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-105 337.0 12.2 3.4e-105 336.8 12.2 1.0 1 Q9Z142
Domain annotation for each sequence (and alignments):
>> Q9Z142
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 336.8 12.2 3.4e-105 3.4e-105 7 240 .] 12 245 .. 7 245 .. 0.99
Alignments for each domain:
== domain 1 score: 336.8 bits; conditional E-value: 3.4e-105
TMEM33_Pom33 7 eslkqhvvanklelalwlarlltvlftvlyilplflssesasaYykallanaatsalrLhqrlpqvqlsreflqrllledschyLlysliFlfsapv 103
+ ++q++++nkl++a+wl+rl+tv++++l++lpl++ +e+as+Y++allana+tsalrLhqrlp++qlsr+fl+++lledschyLlysliF++s+pv
Q9Z142 12 AGAVQFMMTNKLDTAMWLSRLFTVYCSALFVLPLLGLHEAASFYQRALLANALTSALRLHQRLPHFQLSRAFLAQALLEDSCHYLLYSLIFVNSYPV 108
5689********************************************************************************************* PP
TMEM33_Pom33 104 tlallPvalfallHaasytltlldllgsnslvvarllislvesqsqniLkliAlsEivlmpllivllllgraslltpliYyqfLslRYsSrrnPytr 200
t++++Pv+lf+llHaa+yt+++ld gsnsl++ r ++++++++qniLk+iA++Ei+lmp+++++l++g++sll+p+iYy+fL+lRYsSrrnPy+r
Q9Z142 109 TMSIFPVLLFSLLHAATYTKKVLDAKGSNSLPLLRSVLDKLSTNQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFIYYRFLTLRYSSRRNPYCR 205
************************************************************************************************* PP
TMEM33_Pom33 201 nafselrilleklankpscPavirklieklislvsrlapp 240
n+f+elri++e++++kpscP ++r+l+ ++i+++srlap+
Q9Z142 206 NLFNELRIVVEHIIMKPSCPLFVRRLCLQSIAFISRLAPT 245
**************************************95 PP
Or compare Q9Z142 to CDD or PaperBLAST