VIMSS10092272 has 348 amino acids
Query: TMEM33_Pom33 [M=240]
Accession: PF03661.17
Description: Transmembrane protein 33/Nucleoporin POM33
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-19 56.5 6.7 2e-19 56.0 6.7 1.1 1 VIMSS10092272
Domain annotation for each sequence (and alignments):
>> VIMSS10092272
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 56.0 6.7 2e-19 2e-19 19 192 .. 127 305 .. 112 326 .. 0.89
Alignments for each domain:
== domain 1 score: 56.0 bits; conditional E-value: 2e-19
TMEM33_Pom33 19 elalwlarlltvlftvlyilplflssesasaYykallanaatsalrLhqrlpqv.qlsre....flqrllledschyLlysliFlfsap.vtlall 108
+++++ + + +++vl +lpl+ ++ s aY+ ++++a +s L+ ++++ +++ + ++q+++ + y++y+l F++s+ + +al+
VIMSS10092272 127 QTIQFSVNAWVFVIAVLAVLPLIPKNLSNRAYRLSFMGTACSSLYSLYSLYGRPrAWNMQglqvYFQSIVAAKDFIYFIYCLTFVTSHLcLKFALI 222
67889999999999999********99999*******************9999866776555559**********************962689*** PP
TMEM33_Pom33 109 PvalfallHaasytltlldllgsnslvvarll..islvesqsqniLkliAlsEivlmpllivllllgraslltpliYyqfLslRYs 192
P++ al +a +++ ++g ++ + l+ +ves++ ++ l + Ei++ +lli++ll+ ++++++ ++Y+q L+l Y+
VIMSS10092272 223 PILCRALEQVAKFLRR---NFGRSTIYRKYLEdpCVWVESNTTTLNILSSQAEIAIGFLLIISLLSWQRNIIQTFMYWQLLKLMYQ 305
*************996...56777776666668899*******977788899********************************98 PP
Or compare VIMSS10092272 to CDD or PaperBLAST