XP_001351368.2 has 315 amino acids
Query: TMEM33_Pom33 [M=240]
Accession: PF03661.17
Description: Transmembrane protein 33/Nucleoporin POM33
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-12 33.8 28.2 2.3e-12 32.9 28.2 1.3 1 XP_001351368.2
Domain annotation for each sequence (and alignments):
>> XP_001351368.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 32.9 28.2 2.3e-12 2.3e-12 17 230 .. 88 302 .. 77 308 .. 0.75
Alignments for each domain:
== domain 1 score: 32.9 bits; conditional E-value: 2.3e-12
TMEM33_Pom33 17 klelalwlarlltvlftvlyilplflssesasaYykallanaatsa......lrLhqrlpqvqlsreflqrllledschyLlysliFlfsapvtl 105
kl +++++ +++ ++ y+l l l +++ Y k+ + +++ l+L + q + l + ++ + hyL ys+i +f++ l
XP_001351368.2 88 KLPVIIFFYSTFVLCASLFYFLLLSL---NINLYKKLGTFMSLSYLfaylglLLLDY---KTQKNNFSLVNFFSCEKGHYLSYSMILFFIKDAVL 176
67788899999999999999984444...4777877765555555311111122222...3333444478889999******************* PP
TMEM33_Pom33 106 allPvalfallHaasytltlld...llgsnslvvarllislvesqsqniLkliAlsEivlmpllivllllgraslltpliYyqfLslRYsSrrnP 197
+ lP++l l+ + ++l + + ++++ ++ l+s + + n+ + A++Ei + ++i+ l++ rasll ++iY +f +l+Y+S
XP_001351368.2 177 IFLPIFLTLLINIYLIYKQLKSslvPFIQKNYY-INKLVSYMDKMILNVYMMRANIEIYNLLFIIICLFFRRASLLNLIIYTHFFKLKYAS-SDS 269
******998888765555444422233333333.4444577777777777889*************************************6.567 PP
TMEM33_Pom33 198 ytrnafselrilleklankpscPavirkliekl 230
y + s+ ++ +++++p +P+++ ++++k+
XP_001351368.2 270 YFHACYSKNGEMIRQYLSHPMVPRIFLNIFNKI 302
999*************************99987 PP
Or compare XP_001351368.2 to CDD or PaperBLAST