XP_003349881.1 has 286 amino acids
Query: TMEM33_Pom33 [M=240]
Accession: PF03661.17
Description: Transmembrane protein 33/Nucleoporin POM33
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-36 110.7 7.4 5.2e-36 110.3 7.4 1.1 1 XP_003349881.1
Domain annotation for each sequence (and alignments):
>> XP_003349881.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 110.3 7.4 5.2e-36 5.2e-36 12 234 .. 16 263 .. 6 268 .. 0.85
Alignments for each domain:
== domain 1 score: 110.3 bits; conditional E-value: 5.2e-36
TMEM33_Pom33 12 hvvanklelalwlarlltvlftvlyilplflssesas.....aYykallanaatsalrLhqrl.pqvqlsref..lqrllledschyLlysliFl 98
+ a++l++a+++ + +++++++ yi+ + + + +Y+ +l++a+t+ +++++ ++ + ++ + l +++++yLl++l++l
XP_003349881.1 16 QKLAQTLQFAWFAGHATLLICVARYIFSWLRMN-YYGrmaqfCYRTTFLSAALTYGIVVYKTWrARQKTGAKPagAISYLTDENVQYLLLALVWL 109
456899*********************655442.222455669******************98545555554411456699************** PP
TMEM33_Pom33 99 fsapvtlallPvalfallHaasytltlld...................llgsnslvvarllislvesqsqniLkliAlsEivlmplliv.llllg 173
f++ + +a+lP+a+++++H+a+yt+ l + ++ ++ + s+v++ + + + ++A++E+vl +++ ++l++
XP_003349881.1 110 FMPQYPIAMLPFAIYSVFHVATYTRANLIptlmpptkvapaagaspsaKPQYTQHPMSDAIGSFVKQYYDSSMSVVANIELVLWLRIFLnVILFQ 204
*************************99988**********9998877655555556777779*******************99877666156778 PP
TMEM33_Pom33 174 raslltpliYyqfLslRYsSrrnPytrnafselrilleklankpscPavirklieklislv 234
r+s ++++iY fL+ R++ ++ + +n fs++++++++l+ + +P++ r++ e++ +l
XP_003349881.1 205 RRSWILIVIYTVFLRTRFA--QSSHVQNSFSNFEVRIDNLIGAQGTPPAARQAWETVKGLA 263
89*****************..*******************************999887765 PP
Or compare XP_003349881.1 to CDD or PaperBLAST