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Align XP_012048108.1 to PF03661 (UPF0121)

XP_012048108.1 has 278 amino acids

Query:       UPF0121  [M=241]
Accession:   PF03661.13
Description: Uncharacterised protein family (UPF0121)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      7e-43  132.8   4.2    9.8e-43  132.4   4.2    1.1  1  XP_012048108.1  


Domain annotation for each sequence (and alignments):
>> XP_012048108.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.4   4.2   9.8e-43   9.8e-43      22     216 ..       9     231 ..       6     248 .. 0.91

  Alignments for each domain:
  == domain 1  score: 132.4 bits;  conditional E-value: 9.8e-43
         UPF0121  22 lwltrlltllftvlyli..plflss.sysaYykallanaatsalrlhqrlpqlrlsreylerllledsvhyLlysliFlfsaPvtlallPvflfa 113
                     lw++  +t+lf+ +y+i   ++++  + ++Y+ a   + +++ ++++++l++++ls+ +l r+l++++++y l++l + +s+Pv l++lP+++f+
  XP_012048108.1   9 LWALGHFTVLFSTVYIIfqTVLFRGtPVKTYRLAYSGALLSYFIVVYKSLGRPQLSQPWLRRALVDENCQYALLALFWWISKPVNLTVLPFATFS 103
                     67777777777777776699999999********************************************************************* PP

         UPF0121 114 llHaasytktlld..........................vlgsnsl..vvarll.kvislvesqaeniLrliAlieivlmpllivllllgkasll 179
                     l+H++++++t +                               + +  ++ +++ +++ +v++++ +++r++A  ei++   l+  +l++++s++
  XP_012048108.1 104 LFHCLTFLRTNIIpklvppppkpaagaapdaaapgasasQ--PARPpaLLDNISrRIQVWVKTNYDTAMRFVAYAEIFITLRLFAGVLTFRTSFI 196
                     *********99999********************986431..22223466777778899************************************ PP

         UPF0121 180 lpllYyqfLklRYsSrrnPytreafseLrvlletlan 216
                     + l+  +f+++RY    +P tr a++++ + ++++++
  XP_012048108.1 197 TALFMIHFVRFRYH--ASPFTRSAVHDITTRIDAFVA 231
                     **************..***************999875 PP



Or compare XP_012048108.1 to CDD or PaperBLAST