VIMSS159679 has 175 amino acids
Query: DUF308 [M=73]
Accession: PF03729.17
Description: Short repeat of unknown function (DUF308)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-36 110.7 62.0 1.4e-22 66.1 12.1 3.0 3 VIMSS159679
Domain annotation for each sequence (and alignments):
>> VIMSS159679
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 66.1 12.1 1.4e-22 1.4e-22 1 73 [] 11 82 .. 11 82 .. 0.96
2 ! 43.6 16.8 1.4e-15 1.4e-15 3 70 .. 70 137 .. 68 137 .. 0.93
3 ! 26.2 17.2 3.8e-10 3.8e-10 2 46 .. 127 171 .. 126 175 .] 0.92
Alignments for each domain:
== domain 1 score: 66.1 bits; conditional E-value: 1.4e-22
DUF308 1 llGilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkkegggfwllllsGilyiiaGllllf 73
l Gi++i+lGi++l++Pg++ll+++++iG+lll+sGi++ +++f+ rk+++ ++w l+ Gil+i++G+lllf
VIMSS159679 11 LAGIAMIVLGIWFLFHPGISLLTSTLMIGFLLLISGIFHTISYFSDRKSQNVSGW-VLADGILSILLGFLLLF 82
57**********************************************9999988.788************98 PP
== domain 2 score: 43.6 bits; conditional E-value: 1.4e-15
DUF308 3 GilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkkegggfwllllsGilyiiaGll 70
Gil+i+lG+l+l++ + +l+lv+l+G+++l++Gi++ ++af+a++++ +g + l +Gi+ ii+G++
VIMSS159679 70 GILSILLGFLLLFNEFDGTLTLVLLFGMWVLFAGIMRTIGAFTAKQNNVQGWGWILTIGIIGIIVGFI 137
9*****************************************88887776655*************86 PP
== domain 3 score: 26.2 bits; conditional E-value: 3.8e-10
DUF308 2 lGilliilGilaliwPgaallalviliGvlllvsGivqlvaafaa 46
+Gi+ ii+G++al++P+++++ +v++++++++v Gi +++ f+
VIMSS159679 127 IGIIGIIVGFIALFNPVVSAIGIVLVVAIFFIVQGIGAIATFFFI 171
7**************************************877754 PP
Or compare VIMSS159679 to CDD or PaperBLAST