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Align VIMSS186677 to PF03729 (DUF308)

VIMSS186677 has 164 amino acids

Query:       DUF308  [M=73]
Accession:   PF03729.17
Description: Short repeat of unknown function (DUF308)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.6e-27   81.9  39.1    6.9e-17   47.8  12.9    3.0  3  VIMSS186677  


Domain annotation for each sequence (and alignments):
>> VIMSS186677  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   47.8  12.9   6.9e-17   6.9e-17       1      73 []      11      78 ..      11      78 .. 0.91
   2 !   31.0   5.1   1.3e-11   1.3e-11       2      50 ..      65     113 ..      64     120 .. 0.92
   3 !   26.3  12.0   3.7e-10   3.7e-10       2      45 ..     120     163 ..     119     164 .] 0.95

  Alignments for each domain:
  == domain 1  score: 47.8 bits;  conditional E-value: 6.9e-17
       DUF308  1 llGilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkkegggfwllllsGilyiiaGllllf 73
                 l+Gil++i+Gil++i P+ +ll+++i+ G+l++ sGi+ ++ af  +++++ g  l+++ Gi+++++Gl+l+f
  VIMSS186677 11 LEGILMAIVGILFFIKPMDSLLYFTIVAGILIIGSGIFTIIKAF--KSSRK-G--LYIFTGIISVLFGLMLCF 78
                 68******************************************..44334.3..778************986 PP

  == domain 2  score: 31.0 bits;  conditional E-value: 1.3e-11
       DUF308   2 lGilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkke 50 
                  +Gi+++++G+++ + P+ ++ +lvi+ G ++lv Gi+ lv+ f+ ++++
  VIMSS186677  65 TGIISVLFGLMLCFVPLESIDVLVIFYGSWALVNGIFLLVGEFTYKSFG 113
                  7******************************************888754 PP

  == domain 3  score: 26.3 bits;  conditional E-value: 3.7e-10
       DUF308   2 lGilliilGilaliwPgaallalviliGvlllvsGivqlvaafa 45 
                   +illiilG+l+l+ P  +l+a+ ++iGv++++ ++++++ +f+
  VIMSS186677 120 YSILLIILGLLILFEPISFLIATPFIIGVYFIIIAVFEIYLGFK 163
                  58**************************************9995 PP



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