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Align VIMSS5783775 to PF03729 (DUF308)

VIMSS5783775 has 192 amino acids

Query:       DUF308  [M=73]
Accession:   PF03729.17
Description: Short repeat of unknown function (DUF308)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      5e-23   67.5  42.7    1.9e-15   43.2  18.5    3.0  3  VIMSS5783775  


Domain annotation for each sequence (and alignments):
>> VIMSS5783775  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   43.2  18.5   1.9e-15   1.9e-15       1      73 []      26      98 ..      26      98 .. 0.98
   2 !   35.3  15.4   5.5e-13   5.5e-13       2      72 ..      85     154 ..      84     155 .. 0.94
   3 !    6.7   2.8   0.00048   0.00048      12      44 ..     153     185 ..     152     192 .] 0.78

  Alignments for each domain:
  == domain 1  score: 43.2 bits;  conditional E-value: 1.9e-15
        DUF308  1 llGilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkkegggfwllllsGilyiiaGllllf 73
                  ++++l +++Gi+++i+P+ +++++++++G+++++ +i++++aaf +r ++g++ +  ll G +y+ +G+++++
  VIMSS5783775 26 IIAVLGLLAGIICIINPFSSGVVVSVFLGIVFFACAITSIMAAFNSRISSGWSMLITLLAGFIYLFLGYIFIT 98
                  689*******************************************************************985 PP

  == domain 2  score: 35.3 bits;  conditional E-value: 5.5e-13
        DUF308   2 lGilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkkegggfwllllsGilyiiaGllll 72 
                    G +++ lG ++++ P+  +l l+++iG l++++Gi++lv +f++ k    ++w+ +l+G l+++++++ll
  VIMSS5783775  85 AGFIYLFLGYIFITDPLNGMLSLAFIIGYLFIFAGILRLVLGFKQIK-DSFYGWFNILVGFLDLVLAYFLL 154
                   799****************************************6666.88999****************98 PP

  == domain 3  score: 6.7 bits;  conditional E-value: 0.00048
        DUF308  12 laliwPgaallalviliGvlllvsGivqlvaaf 44 
                   l+ + P +++++++ liG+ l++s+i+ l  a 
  VIMSS5783775 153 LLAFGPETSITLVMALIGIQLILSSITILSIAS 185
                   66778999*****************98774444 PP



Or compare VIMSS5783775 to CDD or PaperBLAST