VIMSS10110943 has 324 amino acids
Query: GET4 [M=257]
Accession: PF04190.17
Description: Golgi to ER traffic protein 4
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.1e-76 242.1 0.0 5.3e-76 241.8 0.0 1.1 1 VIMSS10110943
Domain annotation for each sequence (and alignments):
>> VIMSS10110943
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 241.8 0.0 5.3e-76 5.3e-76 2 257 .] 47 320 .. 46 320 .. 0.93
Alignments for each domain:
== domain 1 score: 241.8 bits; conditional E-value: 5.3e-76
GET4 2 kkydeAidllysgalsllkakqggsgaDLallllevyekaelkvdeeskarliellslf.............paeep..................e 66
++++eA+d+l+sga++ l+++ +++gaDLa+l+++++ ka+ ++++e+++r+ +++lf + +
VIMSS10110943 47 QRFSEALDILFSGACIELEHGLVNCGADLAILFVDTLVKAKSPCNDETLDRIRCIFKLFprvpvpphlvdvsD---DedvqnlqeslgearsrveN 139
789******************************************************9988777666666541...1455777888889999999* PP
GET4 67 rkkfikkaikwSakfgeykaGdpeLhhvigellleeg...eyeeAerhlllgtddsaeklakllvewykegepseadlfiaRaVLqylllgnlraA 159
+++f+++aikwSa+fg ++G peLh ++g++l++e ++ +rh++++ +++ek+a++lv+++ +++p+e+dl+iaRaVL+yl++gn+++A
VIMSS10110943 140 LTSFLRAAIKWSAEFGGPRTGYPELHAMLGDYLYTECpelDMVRISRHFVRA--EDPEKFASMLVNFMGRCYPGEDDLAIARAVLMYLSMGNMKDA 233
***********************************88888************..7777************************************** PP
GET4 160 nklldeftkkleskesskasservfpslpllnFlqlLlltiqrkskelFkkLkekYkpslkrdpsfkeylekIgelYFgikpprqqsnglqdmmss 255
n ++de+ k+ e+k+++ +++++l++F+++Ll+t+qr++ lF++L+ kYk+s++rd+ ++e+l++I+e ++g+++++ +lq+m+++
VIMSS10110943 234 NFMMDEIKKQAETKNPE-------LSESDLIQFISYLLETLQRDALPLFNMLRVKYKSSIDRDQLLNELLDEIAERFYGVQRKN----PLQGMFGD 318
***************85.......5669***************9999**********************************555....7******* PP
GET4 256 lf 257
+f
VIMSS10110943 319 IF 320
98 PP
Or compare VIMSS10110943 to CDD or PaperBLAST