biolip::3lkuE has 291 amino acids
Query: GET4 [M=257]
Accession: PF04190.17
Description: Golgi to ER traffic protein 4
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-81 259.2 1.6 3e-81 259.0 1.6 1.1 1 biolip::3lkuE
Domain annotation for each sequence (and alignments):
>> biolip::3lkuE
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 259.0 1.6 3e-81 3e-81 1 247 [. 38 290 .. 38 291 .] 0.95
Alignments for each domain:
== domain 1 score: 259.0 bits; conditional E-value: 3e-81
GET4 1 qkkydeAidllysgalsllkakqggsgaDLallllevyekaelkvdeeskarliellslfpaeeperkkfikkaikwSakfgeykaGdpeLhhvig 96
+k+y++Ai+l+++gals+lkakqggsg+DL+++llevy+ ae+kvd+ s+arl++l+++++++ep++k++i+ +++wS kf+eyk+Gdp+Lh+ ig
biolip::3lkuE 38 SKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIG 133
589********************************************************************************************* PP
GET4 97 ellleegeyeeAerhlllgtddsaeklakllvewyke...gepseadlfiaRaVLqylllgnlraAnklldeftkkleskesska......sse.. 181
++lle + ++eAer+++lgt+ds+ k+++ll++w + e+s+++ f++R+V++yl+++n+++A ++ d f++++ +k ++k
biolip::3lkuE 134 SKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQvddIEDSTVAEFFSRLVFNYLFISNISFAHESKDIFLERFIEKFHPKYekidknG-Yei 228
*****999999**************************76444469************************************99889997643.258 PP
GET4 182 rvfpslpllnFlqlLlltiqrkskelFkkLkekYkpslkrdpsfkeylekIgelYFgikpprqqsn 247
+f++++ lnFlqlLl+t+q+k+k++F +Lk++Y + ++ +k++le +g++YF+i +p+q n
biolip::3lkuE 229 VFFEDYSDLNFLQLLLITCQTKDKSYFLNLKNHYLDFSQA---YKSELEFLGQEYFNIVAPKQ-TN 290
99********************************987776...*******************9.45 PP
Or compare biolip::3lkuE to CDD or PaperBLAST