VIMSS3348074 has 387 amino acids
Query: DUF418 [M=163]
Accession: PF04235.16
Description: Protein of unknown function (DUF418)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.7e-30 91.2 11.3 3.7e-30 91.2 11.3 2.8 3 VIMSS3348074
Domain annotation for each sequence (and alignments):
>> VIMSS3348074
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.5 0.0 0.12 0.12 48 77 .. 25 54 .. 14 67 .. 0.70
2 ? -0.1 0.3 0.046 0.046 135 140 .. 136 141 .. 105 172 .. 0.52
3 ! 91.2 11.3 3.7e-30 3.7e-30 2 157 .. 227 377 .. 226 382 .. 0.92
Alignments for each domain:
== domain 1 score: -1.5 bits; conditional E-value: 0.12
DUF418 48 lslllevlsmlgglalalgYvalillllkk 77
l++l + + +++++ + +gYv+++ +
VIMSS3348074 25 LGTLGTNIWIFTNPEGFIGYVSGVGRAEGV 54
566677777888888888888887765444 PP
== domain 2 score: -0.1 bits; conditional E-value: 0.046
DUF418 135 lqlllS 140
+ l+ S
VIMSS3348074 136 FVLATS 141
222222 PP
== domain 3 score: 91.2 bits; conditional E-value: 3.7e-30
DUF418 2 grkgllkdgeehkrllrrllliglavglplalllallaelaeesallslllevlsmlgglalalgYvalillllkkekr.rrllrplaavGRmALTn 97
+r+g+l+ e ++l rrl+++g++v+lp+ l+ ++ s+ + v ++l++ ++a+g +a+++ ++ + + r+l vGRmAL++
VIMSS3348074 227 FRAGVLA--PEGAELRRRLMIVGFIVALPIDLIVG--------LFWGSAGMLVGRYLTAAIIAFGVLAAVAQFYVAGRVpGIVGRALGTVGRMALSC 313
6888888..6788999******************9........9******************************999997789************** PP
DUF418 98 Yllqsivctllfygyglglfgslgrl....allllallifllqlllSklwlrrfrqGPlEwlwR 157
Y+lq+ ++ +l+yg+glgl++++g+ ++++ +l++++ +l+Sklwl+r+++GPlE lw
VIMSS3348074 314 YVLQNALAGALCYGWGLGLAQRMGPGtvvpGTIGVYALVVAVLMLFSKLWLSRWERGPLEMLWQ 377
************************9844556678888888999********************5 PP
Or compare VIMSS3348074 to CDD or PaperBLAST