PaperBLAST – Find papers about a protein or its homologs

 

Align WP_000264715.1 to PF04241 (DUF423)

WP_000264715.1 has 121 amino acids

Query:       DUF423  [M=87]
Accession:   PF04241.19
Description: Protein of unknown function (DUF423)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.5e-31   94.8   3.5    2.5e-31   94.1   3.5    1.4  1  WP_000264715.1  


Domain annotation for each sequence (and alignments):
>> WP_000264715.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   94.1   3.5   2.5e-31   2.5e-31       1      87 []      16     102 ..      16     102 .. 0.98

  Alignments for each domain:
  == domain 1  score: 94.1 bits;  conditional E-value: 2.5e-31
          DUF423   1 lGAfGaHglkkkleeeqlevfetavqYqlyhalallavallaeaaaakllklagllflaGivlFSgslyllaltgdkllgaitPiGG 87 
                     lGAfGaHglk+ +++eql++++ta+ Y +yhal+lla+++l++      +kl++ll+ +Gi++F+gsly++al   ++lgaitPiGG
  WP_000264715.1  16 LGAFGAHGLKAHASPEQLAWWQTATDYFFYHALGLLALGILSKVLPHFPIKLSFLLIQIGILFFCGSLYIMALGLPRILGAITPIGG 102
                     7*********99999**************************99999999************************999**********9 PP



Or compare WP_000264715.1 to CDD or PaperBLAST