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Align SwissProt::Q55115 to PF04286 (DUF445)

SwissProt::Q55115 has 419 amino acids

Query:       DUF445  [M=367]
Accession:   PF04286.12
Description: Protein of unknown function (DUF445)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
      2e-79  254.1   1.5    2.3e-79  253.9   1.5    1.0  1  SwissProt::Q55115  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q55115  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  253.9   1.5   2.3e-79   2.3e-79       1     364 [.      21     413 ..      21     416 .. 0.95

  Alignments for each domain:
  == domain 1  score: 253.9 bits;  conditional E-value: 2.3e-79
             DUF445   1 aeaAliGaladwfAikaLFRhP.....lg.lpiPfttglIPknkeriakklgnfVeehLLtkes...lakkLkeaevasklaewlk...npt 80 
                        + +++iG++++++Aik+LFR P     lg +++Pft+glIP+n+er+ak+++++++ +LLt+e+   la+kL + e+ + +  wl     ++
  SwissProt::Q55115  21 IAGGIIGYFTNDLAIKMLFR-PykplfLGpYQLPFTPGLIPRNQERLAKRVSDTIMGSLLTPEElqrLARKLLQRERVEGALGWLLqlaLKQ 111
                        679*****************.*******************************************99999*****************666455 PP

             DUF445  81 nkeslaaiveellkeiledlddesikellkknlk..kkleevipepllgkllellleeerhkkllddll......driknllkdeevkekik 164
                         +e+ +++++++l++il+dl++es+++llk++++  + l+++i++ +++ lle++l+e + ++++d+ll      d i+  l d+ ++++i+
  SwissProt::Q55115 112 IREDKQQKTAQILANILRDLFSESLPRLLKALARqdNFLSDQINRIFDQILLEFRLSELQSRQFADWLLgtvlppDTIRLALVDFLSDRNIQ 203
                        5566689999**********************998899****************************************************** PP

             DUF445 165 elidelieeesgklv....lesivsmflreltsilekvksdpdhllreeedkkvreliadllndpelaakveklkkkklsdlevqeyeea.. 250
                         +++ ++e++sg+++    l+++ ++++r + ++le+ ++++ +l +  ++ ++r++++d+l++     ++e+l+ +++++l+++++e    
  SwissProt::Q55115 204 VIDEGFREKTSGTYWvvanLFGVRNSLTRLRAFCLEEKETANLRLKELLLSLEIRNRLKDWLQQ----LSLENLPVSTVRQLRRTTGEVVrt 291
                        ***************************************************************5....*******************99999 PP

             DUF445 251 .lwealkdlllkdlneee.......sllrerisklleklgeklaed..pklreklnkflenaaakvlekyrldiskiveetvnafdaeelee 332
                         + e+++ ll++  ++ +       +  r + s++++     ++e+  + l+++l+++le+++++++++  l i++++ +++n++ a+ele 
  SwissProt::Q55115 292 yIRERGEPLLKDFGSSVDwdnvavlIVNRLQSSTAVTGSLGLVSEElaSILERYLEDDLEKIVKQIIPI--LAIDQVIINRINETPAAELET 381
                        9***********9999999999977777888888888888899999***********************..********************* PP

             DUF445 333 lIelivgkeLqaIrinGtlvGgliGlllylvs 364
                        +++ iv++eLqaI+++G+++G +iG l++ + 
  SwissProt::Q55115 382 AVQAIVRSELQAIVNLGGVLGLIIGGLQTGFF 413
                        ***************************98775 PP



Or compare SwissProt::Q55115 to CDD or PaperBLAST