PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS218952 to PF04341 (DUF485)

VIMSS218952 has 102 amino acids

Query:       DUF485  [M=89]
Accession:   PF04341.16
Description: Protein of unknown function, DUF485
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    7.8e-36  108.3   0.0    8.7e-36  108.2   0.0    1.0  1  VIMSS218952  


Domain annotation for each sequence (and alignments):
>> VIMSS218952  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  108.2   0.0   8.7e-36   8.7e-36       2      88 ..      11      97 ..      10      98 .. 0.98

  Alignments for each domain:
  == domain 1  score: 108.2 bits;  conditional E-value: 8.7e-36
       DUF485  2 aspkFqeLvrkrrrfafpltaiflvvYflfvllvafapdllatkvvegnitvgillgllqfvltfvltglYvrrAnrefDplaeeir 88
                 ++p+Fq+Lvr++rr+   lt+++lvvY++fvllvaf+p+ l++ ++ g++tvg+l+g+l+++l+f+ltg+Yv+rAn+ +Dpl+++++
  VIMSS218952 11 NHPDFQHLVRRKRRLNGSLTLAMLVVYYGFVLLVAFSPSTLGQSLSGGVTTVGMLVGVLMVLLSFALTGIYVHRANNVLDPLNDKVK 97
                 79********************************************88************************************997 PP



Or compare VIMSS218952 to CDD or PaperBLAST