VIMSS142635 has 310 amino acids
Query: DUF535 [M=281]
Accession: PF04393.17
Description: Protein of unknown function (DUF535)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-76 243.1 1.9 2.3e-76 242.8 1.9 1.0 1 VIMSS142635
Domain annotation for each sequence (and alignments):
>> VIMSS142635
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 242.8 1.9 2.3e-76 2.3e-76 7 280 .. 24 286 .. 21 287 .. 0.96
Alignments for each domain:
== domain 1 score: 242.8 bits; conditional E-value: 2.3e-76
DUF535 7 kkrlkfllrsllnprqtrkllqflnqepllkallkaqprllekllrpylskrlsakerlaaivehyrfleeklsaellkklleqe.gltLaelegkee 103
++lk+ lr+++ ++++ ++qf+n++p + l+ ++p+ ++llr+++++r+++k+rl+a++ ++ ++e+++++++l+++ + +l La+ +
VIMSS142635 24 LQHLKYTLRKFFGKKEIYAFEQFVNASPIRQGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILHQMEDYRfHLVLAH----LS 117
5789****************************************************************************998865666665....77 PP
DUF535 104 edfelrLsinagqrkEGelaLelrdeekqllysltFtllreegekallIGglQGpkkeeekevvkqlTKachGlrPkrLlvealrllaqalgveeila 201
+ +l+L+ n++ +EG ++L+lrde +++ly +tF ++ ++ ll +++QGp +ee+k++v+ +TK++hGlrP++L+v al+++a++lg++ ++
VIMSS142635 118 DGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFV----GTHLLTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMG 211
88*************************************....888**************************************************** PP
DUF535 202 vsnkahvyralryrlkkkkklladYdefWeelggeakkkeyyeLPleeerkdleeiaskKRaeYrrRyalldqlaaqva 280
+ +k + + r+k kk+++++Yd+fW+e+g+ + ++y++LP +++rkdl++i+skKR++Yr+Ry++ld++ a+++
VIMSS142635 212 IAQK----HQVKLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLTDIESKKRSMYRKRYEMLDNMVAEMK 286
****....689999************************************************************99997 PP
Or compare VIMSS142635 to CDD or PaperBLAST