VIMSS341835 has 304 amino acids
Query: DUF535 [M=281]
Accession: PF04393.17
Description: Protein of unknown function (DUF535)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-90 288.9 1.9 2.6e-90 288.6 1.9 1.0 1 VIMSS341835
Domain annotation for each sequence (and alignments):
>> VIMSS341835
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 288.6 1.9 2.6e-90 2.6e-90 6 280 .. 29 300 .. 25 301 .. 0.96
Alignments for each domain:
== domain 1 score: 288.6 bits; conditional E-value: 2.6e-90
DUF535 6 akkrlkfllrsllnprqtrkllqflnqepllkallkaqprllekllrpylskrlsakerlaaivehyrfleeklsaellkklleqe.gltLaelegke 102
+ +r+kf++r+l+++r++++l +++ +++ll++l+++++r+lek++rpy+ k+ sa +r +++v+hy++++e+ls+e++ ++++++ gltL++ +++
VIMSS341835 29 WVYRMKFIMRALYYKRAFKHLANNI-ESSLLDMLCTRTHRFLEKPFRPYIIKNNSAFDRSNLVVDHYKTISELLSKETIAEIYTDSkGLTLTS-FEID 124
679**********************.*********************************************************99889****8.6667 PP
DUF535 103 eedfelrLsinagqrkEGelaLelrdeekqllysltFtllreegekallIGglQGpkkeee.kevvkqlTKachGlrPkrLlvealrllaqalgveei 199
+ ++++rL ++a+++kEG+++L+l+++e+ ++y+l+Ft+ + +++++++IGglQGp+++ee + +k+lT++++G rPk+L+v++l+l+aq+++v++i
VIMSS341835 125 DIEYSVRLVYEARYQKEGDMSLVLHSAEDGNFYTLSFTVGHVDTGRCIMIGGLQGPRSSEEnNAKIKKLTRKLYGQRPKSLMVSLLTLIAQVWEVNTI 222
777***********************9999***************************99995668********************************* PP
DUF535 200 lavsnkahvyralryrlkkkkklladYdefWeelggeakkkeyyeLPleeerkdleeiaskKRaeYrrRyalldqlaaqva 280
lav++++h+y a+ry +k ++++dYd++W+elgg ++++++y L ++ +r+d+e ++++KR++YrrRy++ld+++a++a
VIMSS341835 223 LAVKTQSHTYAARRY---SKGRIKTDYDALWQELGGIEYNRHFYALKVNDTRRDTEGMSRSKRSMYRRRYEWLDNTKAEFA 300
***************...699*******************************************************99986 PP
Or compare VIMSS341835 to CDD or PaperBLAST