VIMSS46946 has 288 amino acids
Query: DUF535 [M=281]
Accession: PF04393.17
Description: Protein of unknown function (DUF535)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-69 219.6 7.9 3.3e-69 219.4 7.9 1.0 1 VIMSS46946
Domain annotation for each sequence (and alignments):
>> VIMSS46946
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 219.4 7.9 3.3e-69 3.3e-69 5 280 .. 20 281 .. 16 282 .. 0.94
Alignments for each domain:
== domain 1 score: 219.4 bits; conditional E-value: 3.3e-69
DUF535 5 eakkrlkfllrsllnprqtrkllqfln..qepllkallkaqprllekllrpylskrlsakerlaaivehyrfleeklsaellkklleqegltLaelegk 101
++++l+f++r++l+ +q+r l+++ln ++++lk++++++p+ +++++r++++k+++a+er+++++++++ + ++ k+l +e++ +
VIMSS46946 20 IFWRYLRFQARKILYFPQVRLLEKTLNkeKNKHLKDFFSQRPYACYNATRRFCDKSFKANERVKTLIYDVD------KGLACFKFLPEEQIIFS----- 107
5799**********************9666789*************************************9......66778889*9*999998..... PP
DUF535 102 eeedfelrLsinagqrkEGelaLelrdeekqllysltFtllreegekallIGglQGpkkeee..kevvkqlTKachGlrPkrLlvealrllaqalgvee 198
+edfel+L +n++ ++EG++a++l++++ ++ +++F+++ e++ll +++QG+k ++ e+ k lTK+chGlrP +Ll+e+ ++l++ l++++
VIMSS46946 108 FDEDFELFLGYNYNVCEEGFWAFSLKFKK-YTILQCNFCFT---LENNLLLSCIQGHKYKDFniLEINKILTKKCHGLRPVALLIECSKMLCEILKLQA 202
7999***********************66.88*********...899*************99889********************************** PP
DUF535 199 ilavsnkahvyralryrlkkkkklladYdefWeelggea...kkkeyyeLPleeerkdleeiaskKRaeYrrRyalldqlaaqva 280
l+v++k ++ r+++ k+k +++dY+++W e+gge +k++yy+L ++++k+leei+s+KR++Y++R+a+l++++++++
VIMSS46946 203 TLGVHEK----NQIRSQKGKEKGYFVDYQKIWLENGGELikiNKHKYYKL--HHSQKNLEEIPSQKRSMYKKRFAMLEEIKTNLD 281
*******....799999********************8877788899998..99**************************99875 PP
Or compare VIMSS46946 to CDD or PaperBLAST