VIMSS5789877 has 290 amino acids
Query: DUF535 [M=281]
Accession: PF04393.17
Description: Protein of unknown function (DUF535)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-80 256.6 5.5 1.7e-80 256.4 5.5 1.0 1 VIMSS5789877
Domain annotation for each sequence (and alignments):
>> VIMSS5789877
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 256.4 5.5 1.7e-80 1.7e-80 6 279 .. 24 285 .. 19 287 .. 0.98
Alignments for each domain:
== domain 1 score: 256.4 bits; conditional E-value: 1.7e-80
DUF535 6 akkrlkfllrsllnprqtrkllqflnqepllkallkaqprllekllrpylskrlsakerlaaivehyrfleeklsaellkklleqegltLaelegke 102
+++++++ +r+++ q+ +l ++ln++pl+++l++++ + +++ll +y++k+++ k+rl+ai+e+++ +e+++ +++++l++q+++++a+
VIMSS5789877 24 LREYFRYSFRKVWCSTQCIQLTNYLNNSPLWAELFNQNLYRVNTLLDTYCDKTFNKKQRLKAIKENFTRFENLFRIHFCNQLVTQQEVCIAK----L 116
6899***************************************************************************************8....8 PP
DUF535 103 eedfelrLsinagqrkEGelaLelrdeekqllysltFtllreegekallIGglQGpkkeeekevvkqlTKachGlrPkrLlvealrllaqalgveei 199
+++++l+Lsin+ ++ EG+++L++++++k+++y+++Ftll +e+++lI+++QGp+++ +++++k +TK+++G+rP+ +l+++++l+a+++++ e+
VIMSS5789877 117 SDELNLYLSINQIDPLEGFFSLNIKNNQKEHIYDASFTLL---EENKILISSIQGPNSKSAQDLIKSATKQLYGIRPMFMLIYIFKLIAEKFNL-EL 209
899*************************************...899************************************************.9* PP
DUF535 200 lavsnkahvyralryrlkkkkklladYdefWeelggeakkkeyyeLPleeerkdleeiaskKRaeYrrRyalldqlaaqv 279
l++++k r+++yr++++++ll++Yd fW+++++ k++y++L ++erk+l+ i+skKR++Y++Ry+lld++++++
VIMSS5789877 210 LGIPHK----RQAKYRWNDHSRLLFNYDIFWKDNNAILTKNDYWSLSNNIERKPLNIIPSKKRSMYKKRYQLLDDIKEKI 285
******....9******************************************************************998 PP
Or compare VIMSS5789877 to CDD or PaperBLAST