PaperBLAST – Find papers about a protein or its homologs

 

Align Q8ZRC9 to PF04461 (DUF520)

Q8ZRC9 has 163 amino acids

Query:       DUF520  [M=161]
Accession:   PF04461.17
Description: Protein of unknown function (DUF520)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    8.3e-69  217.0   1.9    9.2e-69  216.8   1.9    1.0  1  Q8ZRC9    


Domain annotation for each sequence (and alignments):
>> Q8ZRC9  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  216.8   1.9   9.2e-69   9.2e-69       1     161 []       2     162 ..       2     162 .. 1.00

  Alignments for each domain:
  == domain 1  score: 216.8 bits;  conditional E-value: 9.2e-69
  DUF520   1 psfDivsevdlqevknAvdqakkeietRfDfkgskaeielkekekeitltaesefklkqvldilksklvkrgvdlkaldvgkvekasgkkvkqevklkegidk 103
             psfDivsevdlqe +n vd+a +e+e+RfDf+g++a+iel++ +k+i++ +es+f+++q+ldil++kl+krg++  +ldv ++  +sgk++  e+klk+gi++
  Q8ZRC9   2 PSFDIVSEVDLQEARNGVDNAVREVESRFDFRGVEATIELNDANKTIKVLSESDFQVNQLLDILRAKLLKRGIEGASLDVPDEFVHSGKTWYVEAKLKQGIES 104
             7****************************************************************************************************** PP

  DUF520 104 ekakkivklikdsklkvqaqiqgdevRvtgkkrDdLQeviallkeedldlplqftNfr 161
                kkivklikdsklkvqaqiqg+e+Rvtgk+rDdLQ+v+al++  dl++p+qf+Nfr
  Q8ZRC9 105 AVQKKIVKLIKDSKLKVQAQIQGEEIRVTGKSRDDLQSVMALVRGGDLGQPFQFKNFR 162
             *********************************************************9 PP



Or compare Q8ZRC9 to CDD or PaperBLAST