PaperBLAST – Find papers about a protein or its homologs

 

Align WP_005367504.1 to PF04461 (DUF520)

WP_005367504.1 has 160 amino acids

Query:       DUF520  [M=161]
Accession:   PF04461.17
Description: Protein of unknown function (DUF520)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-64  203.3   9.8    1.5e-64  203.2   9.8    1.0  1  WP_005367504.1  


Domain annotation for each sequence (and alignments):
>> WP_005367504.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  203.2   9.8   1.5e-64   1.5e-64       1     161 []       2     159 ..       2     159 .. 0.99

  Alignments for each domain:
  == domain 1  score: 203.2 bits;  conditional E-value: 1.5e-64
          DUF520   1 psfDivsevdlqevknAvdqakkeietRfDfkgskaeielkekekeitltaesefklkqvldilksklvkrgvdlkaldvgkvekasgkkvkqev 95 
                     psfDivsevd  e+knAvd++k+e++tRfDf++++++iel++  + +++t+esef+++q++ il+s+l+krgvd++al+ +   + sgk+++q++
  WP_005367504.1   2 PSFDIVSEVDSVEIKNAVDNSKRELDTRFDFRNVESSIELNK--EIVKITSESEFQVDQIVAILRSNLAKRGVDANALERKA-VTFSGKTASQNI 93 
                     7***************************************77..79*********************************988.89********** PP

          DUF520  96 klkegidkekakkivklikdsklkvqaqiqgdevRvtgkkrDdLQeviallkeedldlplqftNfr 161
                     ++k+g+++ +akk+vk+ikd+klkvq +iqg+++RvtgkkrDdLQ++++l++e++l++p+qf+Nfr
  WP_005367504.1  94 EFKQGVETTNAKKLVKAIKDAKLKVQVSIQGEKLRVTGKKRDDLQATMSLVREQELGQPFQFDNFR 159
                     *****************************************************************9 PP



Or compare WP_005367504.1 to CDD or PaperBLAST