NP_001104303.1 has 345 amino acids
Query: Saf4_Yju2 [M=333] Accession: PF04502.17 Description: Saf4/Yju2 protein Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.1e-123 397.7 10.8 3.6e-123 397.5 10.8 1.0 1 NP_001104303.1 Domain annotation for each sequence (and alignments): >> NP_001104303.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 397.5 10.8 3.6e-123 3.6e-123 1 333 [] 9 341 .. 9 341 .. 0.85 Alignments for each domain: == domain 1 score: 397.5 bits; conditional E-value: 3.6e-123 Saf4_Yju2 1 kYyPPDfDpskiprerarknrqlvvRlmaPfnirCktCgeyIykGkkFNarkekVenetYlgipIfrFyiKCtrClaeiefkTDPkntdYvieeG 95 kYyPPDfDpskip+ +++k+rq+vvRlmaPfn+rCktCgeyIykGkkFNarke+V+ne Ylg+pIfrFyiKCtrClaei+fkTDP+ntdY +e+G NP_001104303.1 9 KYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARKETVQNELYLGLPIFRFYIKCTRCLAEITFKTDPENTDYAMEHG 103 9********************************************************************************************** PP Saf4_Yju2 96 atRnfeaekleeeeakreekereeeeaedamkklEkrtkdskkemealesLeeLkelnqrqakvdyeamlelrrefreekkereeeeedeealke 190 atRnf+aekl eee+k+ ++ere+ee +++mk+lE+rt+dsk eme+le+L+eLkelnqrqa+vd+e ml +++e ++++k+re+ee de+++ke NP_001104303.1 104 ATRNFQAEKLIEEEEKKIQQEREDEELNNPMKVLENRTRDSKLEMEVLENLQELKELNQRQAQVDFEGMLGQYKELEQRQKQREQEE-DEQETKE 197 **************************************************************************************9.******8 PP Saf4_Yju2 191 klsleiiellpedeedkkeaalvegksskelfessekskksekkskptdskkseaskkkkkeslkkslskltkkkallllvvrkkkkeesksksk 285 +l+ + +++l++++++ +ea+ + +s+ ++ ++k+++ +++++t+ ++ +s+ +kk+s+++s+++l+ k al +lvvrkk+++++++ s+ NP_001104303.1 198 MLERALVKRLRDSDSE-EEAENAKERSK---KHIADKPTDILTTDTSTS-SQGLSSAVAKKQSWDRSVGGLSVKGALGSLVVRKKPADSASKPSH 287 8888999**9887744.45555544333...334444445555544444.347888999***************************995444444 PP Saf4_Yju2 286 eekkeeekkeskeesakeeetss..ek.....kaskskakssslsllaaysdssd 333 ++ + +++++ +++ a + e+ s ++ + s ++ ssl+ll+aysds+d NP_001104303.1 288 AAPPPAAAAAGTQTGAVKPES-SitSSsassnIQPVSCQNGSSLGLLGAYSDSDD 341 444444444444444443333.33411345556667889999***********98 PP
Or compare NP_001104303.1 to CDD or PaperBLAST