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Align NP_060544.2 to PF04502 (Saf4_Yju2)

NP_060544.2 has 323 amino acids

Query:       Saf4_Yju2  [M=333]
Accession:   PF04502.17
Description: Saf4/Yju2 protein
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   1.7e-120  388.7   7.6     2e-120  388.4   7.6    1.0  1  NP_060544.2  


Domain annotation for each sequence (and alignments):
>> NP_060544.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  388.4   7.6    2e-120    2e-120       1     333 []       9     318 ..       9     318 .. 0.87

  Alignments for each domain:
  == domain 1  score: 388.4 bits;  conditional E-value: 2e-120
    Saf4_Yju2   1 kYyPPDfDpskiprerarknrqlvvRlmaPfnirCktCgeyIykGkkFNarkekVenetYlgipIfrFyiKCtrClaeiefkTDPkntdYvieeGatR 98 
                  kYyPPDfDpskip+ +++k+rq+vvRlmaPfn+rCktCgeyIykGkkFNarke+V+ne Ylg+pIfrFyiKCtrClaei+fkTDP+ntdY++e+GatR
  NP_060544.2   9 KYYPPDFDPSKIPKLKLPKDRQYVVRLMAPFNMRCKTCGEYIYKGKKFNARKETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATR 106
                  9************************************************************************************************* PP

    Saf4_Yju2  99 nfeaekleeeeakreekereeeeaedamkklEkrtkdskkemealesLeeLkelnqrqakvdyeamlelrrefreekkereeeeedeealkeklslei 196
                  nf+aekl eee+kr +kere+ee +++mk+lE+rtkdsk eme+le+L+eLk+lnqrqa+vd+eaml+++r ++ee++++++ee de+++ + l+ ++
  NP_060544.2 107 NFQAEKLLEEEEKRVQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHRLSEEERRRQQQEE-DEQETAALLEEAR 203
                  ***********************************************************************9999999999998.******8888888 PP

    Saf4_Yju2 197 iellpedeedkkeaalvegksskelfessekskksekkskptdskkseaskkkkkeslkkslskltkkkallllvvrkkkkeeskskskeekkeeekk 294
                  +++l ed+++++eaa              +++ + +   +pt++++++ ++k+k e +++s+++l ++  l++lvv+kk+k+ ++ ++ + +  ++ +
  NP_060544.2 204 KRRLLEDSDSEDEAA--------------PSPLQPALRPNPTAILDEAPKPKRKVEVWEQSVGSLGSRPPLSRLVVVKKAKADPDCSNGQPQ--AAPT 285
                  999999887744442..............222233334477888889999******************************995443332222..2222 PP

    Saf4_Yju2 295 eskeesakeeetssekkaskskakssslsllaaysdssd 333
                    +++++ke+      +++  ++++ssls+l+ay ds+d
  NP_060544.2 286 PGAPQNRKEA------NPTPLTPGASSLSQLGAYLDSDD 318
                  2222222222......35678899*************98 PP



Or compare NP_060544.2 to CDD or PaperBLAST