PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS10092564 to PF04504 (DUF573)

VIMSS10092564 has 456 amino acids

Query:       DUF573  [M=94]
Accession:   PF04504.18
Description: Protein of unknown function, DUF573
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-36  111.5   0.9    2.4e-36  110.6   0.9    1.5  1  VIMSS10092564  


Domain annotation for each sequence (and alignments):
>> VIMSS10092564  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.6   0.9   2.4e-36   2.4e-36       1      94 []     138     234 ..     138     234 .. 0.94

  Alignments for each domain:
  == domain 1  score: 110.6 bits;  conditional E-value: 2.4e-36
         DUF573   1 fqrlWseeDEieiLqglldf.ksktgkspk.ddldafyeavkkslsfdvskeqlveKirrLkkkyenkakka.kgkepsfskphdqklfelskkIW 93 
                    fqrlW++eDEie+L+g+ld+ ++++g+s++ +d++ fye++k++l+ d++k+qlveK+rrLkkky+n ++k+ +gke+ f++phdq++fe+s+kIW
  VIMSS10092564 138 FQRLWTDEDEIELLRGFLDYmTMHRGSSSHpPDTAPFYEQIKSKLQLDFNKNQLVEKLRRLKKKYRNVMSKIsSGKEVFFKSPHDQSTFEISRKIW 233
                    8*******************55556666669***************************************************************** PP

         DUF573  94 g 94 
                    +
  VIMSS10092564 234 N 234
                    5 PP



Or compare VIMSS10092564 to CDD or PaperBLAST