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Align NP_001131228.1 to PF04535 (CASP_dom)

NP_001131228.1 has 213 amino acids

Query:       CASP_dom  [M=151]
Accession:   PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      1e-41  128.3   7.5    1.6e-41  127.7   7.5    1.3  1  NP_001131228.1  


Domain annotation for each sequence (and alignments):
>> NP_001131228.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  127.7   7.5   1.6e-41   1.6e-41       3     151 .]      38     177 ..      36     177 .. 0.96

  Alignments for each domain:
  == domain 1  score: 127.7 bits;  conditional E-value: 1.6e-41
        CASP_dom   3 klrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDqvl 97 
                     ++r +e +LR++ l l++aa++vm  n+q++e     + + +sdl  f+ylv+an+++a+Ysl++++ ++v       + + ++ +l+f+lDqv+
  NP_001131228.1  38 RVRPVETLLRAAPLGLCVAAMTVMLRNQQSNEY----GAVAYSDLGGFKYLVYANGLCAAYSLVSAFYTAVPR-----PATVSRSWLVFLLDQVF 123
                     678899***********************9998....89*******************************866.....89999************ PP

        CASP_dom  98 aylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
                     +yl+l+A +Aaa+  yla++g++e++W+++C +fg+Fc++++++va++f ++l+
  NP_001131228.1 124 TYLILAAGAAAAELLYLAYNGDKEVTWSEACGVFGSFCRQARTSVAITFGTVLC 177
                     *************************************************99875 PP



Or compare NP_001131228.1 to CDD or PaperBLAST