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Align NP_001237047.1 to PF04535 (DUF588)

NP_001237047.1 has 182 amino acids

Query:       DUF588  [M=150]
Accession:   PF04535.12
Description: Domain of unknown function (DUF588)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.8e-29   87.3  11.9    5.6e-29   87.1  11.9    1.1  1  NP_001237047.1  


Domain annotation for each sequence (and alignments):
>> NP_001237047.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.1  11.9   5.6e-29   5.6e-29       3     149 ..      39     166 ..      37     167 .. 0.94

  Alignments for each domain:
  == domain 1  score: 87.1 bits;  conditional E-value: 5.6e-29
          DUF588   3 klrvaelvLRlaavvlalaaavvmatnkqtkevfkiqveakfsdlpafvylvvanaiaavYsllqlvlsvvslvrkk.ersaalalllfllDqvl 96 
                     ++++ +l+LR++++v+a+aa+++ma++++            f +++af+ylv+a++++a++s+ +++ +v++l++++  ++ + ++l+ ++D v+
  NP_001237047.1  39 PGTAGGLSLRVSQFVFAAAALSIMASTSD------------FPSVTAFCYLVAAAGLQALWSFSLAITDVYALLVRRsLQNYRIVSLFTVGDGVT 121
                     677889***********************............**********************************9999999************* PP

          DUF588  97 aylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcervaaavalsflafl 149
                     ++l+++Aa+A+a+++ l+ +++        C+q++  c ++++a+ ++fl ++
  NP_001237047.1 122 STLTFAAACASAGITVLI-DNDLG-----SCSQNH--CVQFETATGMAFLCWF 166
                     ***************666.55555.....8*****..*************997 PP



Or compare NP_001237047.1 to CDD or PaperBLAST