NP_001358801.1 has 186 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.2e-53 164.8 9.5 8.4e-53 164.4 9.5 1.2 1 NP_001358801.1
Domain annotation for each sequence (and alignments):
>> NP_001358801.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 164.4 9.5 8.4e-53 8.4e-53 2 150 .. 23 170 .. 22 171 .. 0.98
Alignments for each domain:
== domain 1 score: 164.4 bits; conditional E-value: 8.4e-53
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevf..kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilD 94
+++++++l+LR++a++ +la+a+ m+t+++t+++f +i++ka++sdlp+++++vvan+i+++Y +l+l+ls+v+++r +r+k+++lll++lD
NP_001358801.1 23 KGVSVLDLILRFIAIIGTLASAIAMGTTNETLPFFtqFIRFKAQYSDLPTLTFFVVANSIVCAYLTLSLPLSIVHIIR---SRAKYSRLLLVVLD 114
57899************************************************************************9...9999********** PP
CASP_dom 95 qvlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafl 150
++++l++++asAaaa+vyla+kgn +a+Wl+iC+qf++Fc+r++++++ sf a++
NP_001358801.1 115 AAMLALVTAGASAAAAIVYLAHKGNVRANWLAICQQFDSFCERISGSLVGSFGAMV 170
****************************************************9987 PP
Or compare NP_001358801.1 to CDD or PaperBLAST