Q8L8Z1 has 190 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.2e-43 133.2 6.5 3.8e-43 133.0 6.5 1.1 1 Q8L8Z1
Domain annotation for each sequence (and alignments):
>> Q8L8Z1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 133.0 6.5 3.8e-43 3.8e-43 4 151 .] 24 177 .. 21 177 .. 0.95
Alignments for each domain:
== domain 1 score: 133.0 bits; conditional E-value: 3.8e-43
CASP_dom 4 lrlaelvLRllalvlalaaavvmatnkqtkevf..........kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilD 94
+ +el +R+lalvl+++aa+v++++kqtk+v +++++ak s+l+af+y + anaia++Y+++++v+ ++s + +rsk+l+++++i+D
Q8L8Z1 24 RKGLELTMRVLALVLTMVAATVLGVAKQTKVVPikliptlpplNVSTTAKASYLSAFVYNISANAIACGYTAISIVIVMISK--G--KRSKSLLMAVLIGD 120
57789***************************9********************************************98644..3..67888********* PP
CASP_dom 95 qvlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
++++ll+s+++Aa a+ ++++gn+++ W+k+C +fgkFcn++a++va++++a+++
Q8L8Z1 121 LMMVALLFSSTGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASVV 177
******************************************************985 PP
Or compare Q8L8Z1 to CDD or PaperBLAST