SwissProt::P0DKC2 has 186 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.3e-51 157.9 7.0 1e-50 157.6 7.0 1.1 1 SwissProt::P0DKC2
Domain annotation for each sequence (and alignments):
>> SwissProt::P0DKC2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 157.6 7.0 1e-50 1e-50 2 149 .. 23 169 .. 22 171 .. 0.97
Alignments for each domain:
== domain 1 score: 157.6 bits; conditional E-value: 1e-50
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevf..kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllf 91
r++++++++LRl+a+v++la+a+ m+t+++++++f +i+++a+++dlp++r +vva+a a++Y +l+l+ls+ +++r +++++ +++l+
SwissProt::P0DKC2 23 RAVSVLDFILRLIAVVATLASAIAMGTTDESLPFFtqFIRFRAEYDDLPTLRLFVVASAFASGYLILSLPLSILHITR---SSARRTRVILI 111
7899************************************************************************99...777778***** PP
CASP_dom 92 ilDqvlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflaf 149
ilD+v+++ l++A+sAaaa+vyla+kgn +a+W ++C+q+++Fc+r++++++ sf+a+
SwissProt::P0DKC2 112 ILDMVMLTSLTAASSAAAAIVYLAHKGNAKANWFAFCQQYDSFCERISGSLIGSFIAI 169
********************************************************96 PP
Or compare SwissProt::P0DKC2 to CDD or PaperBLAST