SwissProt::Q8GWD5 has 178 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-27 80.9 5.4 5.4e-27 80.6 5.4 1.1 1 SwissProt::Q8GWD5
Domain annotation for each sequence (and alignments):
>> SwissProt::Q8GWD5
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 80.6 5.4 5.4e-27 5.4e-27 4 150 .. 13 157 .. 10 158 .. 0.94
Alignments for each domain:
== domain 1 score: 80.6 bits; conditional E-value: 5.4e-27
CASP_dom 4 lrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDq 95
lr++ l+LR+l++++ l+++v++ tn+ t+e+++++ k f+d+ a+ry++ a++i vY+++ql+l++ +++++k++ ++f +D
SwissProt::Q8GWD5 13 LRTVLLLLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFLTISQFATGKTHPL--TYQFDFYGDK 102
78999********************************************************************9875555..89******** PP
CASP_dom 96 vlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafl 150
v++yll+++++A ++v++ +k+ ++ + + ++kF+++ a+++l ++af+
SwissProt::Q8GWD5 103 VISYLLATGSAAGFGVSKDLKDTYIALIEFDSTDPVDKFFSKGYASASLLLFAFV 157
********************999777777778999******************97 PP
Or compare SwissProt::Q8GWD5 to CDD or PaperBLAST