SwissProt::Q8L9B5 has 182 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-49 154.2 8.8 1.5e-49 153.8 8.8 1.1 1 SwissProt::Q8L9B5
Domain annotation for each sequence (and alignments):
>> SwissProt::Q8L9B5
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 153.8 8.8 1.5e-49 1.5e-49 2 151 .] 6 155 .. 5 155 .. 0.98
Alignments for each domain:
== domain 1 score: 153.8 bits; conditional E-value: 1.5e-49
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfil 93
r++rl+el+LR++ v+al+a+++++t+++ k +f+i+k+ak++d++a ++lvvan+iaavYsllq v++vv +++k ++sk la+++f +
SwissProt::Q8L9B5 6 RRMRLTELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAVYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSG 97
7899**************************************************************************************** PP
CASP_dom 94 DqvlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
Dq++ayl ++A +A+a+ +a++g++++qW+ +C ++gkFcn++a+ v+ ++la+++
SwissProt::Q8L9B5 98 DQAMAYLNVAAIAATAESGVIAREGEEDLQWMRVCTMYGKFCNQMAIGVSSALLASIA 155
*******************************************************985 PP
Or compare SwissProt::Q8L9B5 to CDD or PaperBLAST