SwissProt::Q945M8 has 154 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.9e-36 109.3 5.9 9.3e-36 109.0 5.9 1.1 1 SwissProt::Q945M8
Domain annotation for each sequence (and alignments):
>> SwissProt::Q945M8
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 109.0 5.9 9.3e-36 9.3e-36 3 150 .. 8 138 .. 6 139 .. 0.95
Alignments for each domain:
== domain 1 score: 109.0 bits; conditional E-value: 9.3e-36
CASP_dom 3 klrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilD 94
++++++l+LR+++++ a+a++ vm+++k+ fs +af+yl+++++++ ++s+ +++l+v++l+ kk+++++ l++l++++D
SwissProt::Q945M8 8 PGTVCGLLLRIGQCASAAASIGVMVSAKE------------FSVHTAFCYLIASMGLQLLWSFGLACLDVYALRGKKDLQNPILVSLFVVGD 87
6899*************************............*************************************************** PP
CASP_dom 95 qvlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkF.cnrvaaavalsflafl 150
+v+a+l+l+Aa+++a+vv l ++++ + Cn+ ++ c r+++avalsf++++
SwissProt::Q945M8 88 WVTAMLSLAAACSSAGVVVL-YEKDIK-----YCNTQSQYpCLRYEVAVALSFVTWI 138
******************55.555544.....8**********************97 PP
Or compare SwissProt::Q945M8 to CDD or PaperBLAST