SwissProt::Q9FFT2 has 194 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-37 114.7 3.6 2.3e-37 114.3 3.6 1.1 1 SwissProt::Q9FFT2
Domain annotation for each sequence (and alignments):
>> SwissProt::Q9FFT2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 114.3 3.6 2.3e-37 2.3e-37 2 150 .. 27 165 .. 26 166 .. 0.95
Alignments for each domain:
== domain 1 score: 114.3 bits; conditional E-value: 2.3e-37
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfil 93
++l++++ +LRl+++ l++a++++ +tn+++++ + ++ +++++ ++y+v+++ai+a+Y+ll++v s+v ++ ++a+l+fi
SwissProt::Q9FFT2 27 MSLKIIDSCLRLSVVPLSVATIWLTVTNHESNPDY---GNLEYNSIMGLKYMVGVSAISAIYALLSTVSSWV-------TCLVSKAWLFFIP 108
57899**************************9998...9********************************9.......5566799****** PP
CASP_dom 94 DqvlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafl 150
Dqvlay+++++++ a+++vyl++kg++ ++W+++C++++++c++ ++a+ l+++ ++
SwissProt::Q9FFT2 109 DQVLAYVMTTSVAGATEIVYLLNKGDKIVTWSEMCSSYPHYCSKLTIALGLHVFVLF 165
***************************************************998776 PP
Or compare SwissProt::Q9FFT2 to CDD or PaperBLAST