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Align SwissProt::Q9SUP0 to PF04535 (CASP_dom)

SwissProt::Q9SUP0 has 197 amino acids

Query:       CASP_dom  [M=151]
Accession:   PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    4.6e-44  136.0   8.7    6.8e-44  135.4   8.7    1.2  1  SwissProt::Q9SUP0  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q9SUP0  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  135.4   8.7   6.8e-44   6.8e-44       4     151 .]      15     168 ..      12     168 .. 0.96

  Alignments for each domain:
  == domain 1  score: 135.4 bits;  conditional E-value: 6.8e-44
           CASP_dom   4 lrlaelvLRllalvlalaaavvmatnkqtkevf.........kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskal 86 
                         +++ l LR++a++++laaa+vm +nk+tk+++         k++++akf+++paf+++v+an+++++++ll++v++++s +    e +  +
  SwissProt::Q9SUP0  15 SWKLLLGLRIFAFMATLAAAIVMSLNKETKTLVvatigtvpiKATLTAKFQHTPAFVFFVIANVMVSFHNLLMIVVQIFSRKL---EYKGLR 103
                        667889*************************99*********************************************98876...888889 PP

           CASP_dom  87 alllfilDqvlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
                        +l ++ilD++ a+l+ +Aa Aa+ v++l+k+gn++a+W+k+C+ f+++c++ a+a++++f++++l
  SwissProt::Q9SUP0 104 LLSIAILDMLNATLVSAAANAAVFVAELGKNGNKHAKWNKVCDRFTTYCDHGAGAIIAAFAGVIL 168
                        999**********************************************************9985 PP



Or compare SwissProt::Q9SUP0 to CDD or PaperBLAST