VIMSS10079701 has 209 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-47 146.7 4.7 2.7e-47 146.5 4.7 1.1 1 VIMSS10079701
Domain annotation for each sequence (and alignments):
>> VIMSS10079701
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 146.5 4.7 2.7e-47 2.7e-47 2 151 .] 46 194 .. 45 194 .. 0.96
Alignments for each domain:
== domain 1 score: 146.5 bits; conditional E-value: 2.7e-47
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevf..kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDq 95
++++++++vLRl+a++ ++ +a+ m+t++++++ + + +k+k+sdlp+++++vvanai+ +Y +l+l++s++++++ +++k+++++l+++D+
VIMSS10079701 46 KGISVLGFVLRLFAVFGTIGSALAMGTTHESVVSLsqLVLLKVKYSDLPTLMFFVVANAISGGYLVLSLPVSIFHIFS---TQAKTSRIILLVVDT 138
578999************************7666699999*************************************8...99999********** PP
CASP_dom 96 vlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
v+++l+ s+asAa+a vyla++gn+ a+W++iC+qf+ Fc+r++++++ sf+a++l
VIMSS10079701 139 VMLALVSSGASAATATVYLAHEGNTTANWPPICQQFDGFCERISGSLIGSFCAVIL 194
*****************************************************986 PP
Or compare VIMSS10079701 to CDD or PaperBLAST