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Align VIMSS10080041 to PF04535 (CASP_dom)

VIMSS10080041 has 204 amino acids

Query:       CASP_dom  [M=151]
Accession:   PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    5.9e-46  142.1   9.9    5.9e-46  142.1   9.9    1.3  1  VIMSS10080041  


Domain annotation for each sequence (and alignments):
>> VIMSS10080041  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  142.1   9.9   5.9e-46   5.9e-46       3     150 ..      29     168 ..      27     169 .. 0.96

  Alignments for each domain:
  == domain 1  score: 142.1 bits;  conditional E-value: 5.9e-46
       CASP_dom   3 klrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDqvla 98 
                    ++r+ae +LRl+ + l++aa+vvm  +++t+e+    ++ ++s+l+afrylv+an+i+a+Ysll+++++++  +    ++++ +++++f+lDq+l+
  VIMSS10080041  29 GIRTAETMLRLAPVGLCVAALVVMLKDSETNEF----GSISYSNLTAFRYLVHANGICAGYSLLSAAIAAMPRS----SSTMPRVWTFFCLDQLLT 116
                    5789*****************************....89*******************************8765....7999************** PP

       CASP_dom  99 ylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafl 150
                    yl+l+A + +a+v yla++g+s+++W+++C+++g Fc+r++a+v+++f+ ++
  VIMSS10080041 117 YLVLAAGAVSAEVLYLAYNGDSAITWSDACSSYGGFCHRATASVIITFFVVC 168
                    *************************************************987 PP



Or compare VIMSS10080041 to CDD or PaperBLAST