VIMSS10090692 has 201 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-51 160.1 8.4 2.1e-51 159.8 8.4 1.1 1 VIMSS10090692
Domain annotation for each sequence (and alignments):
>> VIMSS10090692
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 159.8 8.4 2.1e-51 2.1e-51 2 150 .. 25 173 .. 24 174 .. 0.99
Alignments for each domain:
== domain 1 score: 159.8 bits; conditional E-value: 2.1e-51
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDqvl 97
rk+r++el+LR+l++vlal+aa+++at+ q e+f iqkkakf+d++a++ lvv+n+iaa+Ysl+q+v++vv l++++ ++sk la+++f++Dq++
VIMSS10090692 25 RKVRVTELILRCLVCVLALVAAILIATDVQVREIFMIQKKAKFTDMKALVLLVVVNGIAAGYSLVQAVRCVVGLMKGRVLFSKPLAWAIFFGDQAV 120
789********************************************************************************************* PP
CASP_dom 98 aylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafl 150
ayl++++++Aaa+ + ak g+ e+qW+kiCn++gkFcn+v +a +++a++
VIMSS10090692 121 AYLCVAGVAAAAQSAAFAKLGEPELQWMKICNMYGKFCNQVGEGIASALFACI 173
***************************************************97 PP
Or compare VIMSS10090692 to CDD or PaperBLAST