VIMSS10090760 has 283 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-37 114.2 4.5 3.5e-37 113.6 4.5 1.3 1 VIMSS10090760
Domain annotation for each sequence (and alignments):
>> VIMSS10090760
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 113.6 4.5 3.5e-37 3.5e-37 4 151 .] 132 265 .. 129 265 .. 0.94
Alignments for each domain:
== domain 1 score: 113.6 bits; conditional E-value: 3.5e-37
CASP_dom 4 lrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkk...serskalalllfilDqv 96
++ + l +Rl+ +vlal+++++ma++k+ k++ ++f++++++r+++ +n++a+vYs +q++ +++lv++k s++ + l+ fi+Dqv
VIMSS10090760 132 VKFSALGFRLSEVVLALISFSIMAADKT-----KGWSGDSFDRYKEYRFCLSVNVVAFVYSSFQACDLAYHLVKEKhliSHH--LRPLFEFIIDQV 220
677899**********************.....9****************************************99864333..5999******** PP
CASP_dom 97 laylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
layll+sA+ Aa+++v+ + ++ +++++F+++++a++a+sflafl+
VIMSS10090760 221 LAYLLMSASTAAVTRVDDWVSN----------WGKDEFTEMASASIAMSFLAFLA 265
**********************..........899******************85 PP
Or compare VIMSS10090760 to CDD or PaperBLAST