VIMSS10093298 has 204 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-50 156.8 7.4 2.3e-50 156.4 7.4 1.1 1 VIMSS10093298
Domain annotation for each sequence (and alignments):
>> VIMSS10093298
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 156.4 7.4 2.3e-50 2.3e-50 2 151 .] 41 189 .. 40 189 .. 0.98
Alignments for each domain:
== domain 1 score: 156.4 bits; conditional E-value: 2.3e-50
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevf..kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDq 95
r+l++++++LRl+a+v+alaaa+ m+t+++t+++f ++q++a+++dlp+f+++v+a+a++ +Y +l+l++svv ++r + ++a +lll++lD+
VIMSS10093298 41 RGLAIFDFLLRLAAIVAALAAAATMGTSDETLPFFtqFLQFEASYDDLPTFQFFVIAMALVGGYLVLSLPISVVTILR---PLATAPRLLLLVLDT 133
67899************************************************************************9...8899*********** PP
CASP_dom 96 vlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
+++l ++Aas+aaa++yla++gn++++Wl+iC+qfg+Fc++ ++av+ +f+++++
VIMSS10093298 134 GVLALNTAAASSAAAISYLAHSGNQNTNWLPICQQFGDFCQKSSGAVVSAFVSVVF 189
*****************************************************986 PP
Or compare VIMSS10093298 to CDD or PaperBLAST