VIMSS10097899 has 194 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-36 111.8 8.8 1.9e-36 111.3 8.8 1.2 1 VIMSS10097899
Domain annotation for each sequence (and alignments):
>> VIMSS10097899
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 111.3 8.8 1.9e-36 1.9e-36 4 151 .] 33 168 .. 31 168 .. 0.94
Alignments for each domain:
== domain 1 score: 111.3 bits; conditional E-value: 1.9e-36
CASP_dom 4 lrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkk...serskalalllfilDqv 96
++++ l+LRl+ + ++la+av+m tn+ ++ + +++d++afr+++vanai+a+Ys++++ +v++++r++ + ++ +++++f +Dqv
VIMSS10097899 33 FNSLILLLRLASFSFSLASAVFMLTNSR------GSASPHWYDFDAFRFVFVANAIVALYSVFEMGTCVWEFSRETtlwP--EAFQVWFDFGHDQV 120
566789*********************9......78999***********************************999544..556*********** PP
CASP_dom 97 laylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
++ylllsA sAaaa + ++ g + C +++ Fc + +a+ l f+afl+
VIMSS10097899 121 FSYLLLSAGSAAAALARTMRGG-------DTCTANKAFCLQSDVAIGLGFAAFLF 168
********************99.......59**********************86 PP
Or compare VIMSS10097899 to CDD or PaperBLAST