VIMSS10101095 has 193 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-45 141.3 8.9 1.3e-45 141.0 8.9 1.1 1 VIMSS10101095
Domain annotation for each sequence (and alignments):
>> VIMSS10101095
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 141.0 8.9 1.3e-45 1.3e-45 2 151 .] 24 176 .. 23 176 .. 0.95
Alignments for each domain:
== domain 1 score: 141.0 bits; conditional E-value: 1.3e-45
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevf.....kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfi 92
++++++++vLR++ ++++l+++vvm+t+kqtk++f a+f+++pa++y+vva ++a++Ys+++++++v ++++ ++s+ l+l l+i
VIMSS10101095 24 KSCSMTQVVLRFVLFAATLTSIVVMVTSKQTKNIFlpgtpIRIPAAEFTNSPALIYFVVALSVACFYSIVSTFVTVSAFKK--HSCSAVLLLNLAI 117
57899********************************996444579******************************98855..799999******* PP
CASP_dom 93 lDqvlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
+D v++ +++sA++A +v+yl+ kgn+e++W kiC+ ++kFc++v +a+a+s++a+++
VIMSS10101095 118 MDAVMVGIVASATGAGGGVAYLGLKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVV 176
********************************************************985 PP
Or compare VIMSS10101095 to CDD or PaperBLAST