VIMSS10108792 has 197 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.6e-45 138.4 5.4 1.2e-44 137.9 5.4 1.2 1 VIMSS10108792
Domain annotation for each sequence (and alignments):
>> VIMSS10108792
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 137.9 5.4 1.2e-44 1.2e-44 5 151 .] 16 168 .. 12 168 .. 0.96
Alignments for each domain:
== domain 1 score: 137.9 bits; conditional E-value: 1.2e-44
CASP_dom 5 rlaelvLRllalvlalaaavvmatnkqtkevf.........kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllf 91
++ l LRlla+ ++l aa+vm++nk+tk++ +++++akf+++paf+++vvana++++++ll+++l+++ ++ e++ ++l ++
VIMSS10108792 16 CKILLGLRLLAFSATLSAAIVMGLNKETKTFIvgkvgntpiQATFTAKFDHTPAFVFFVVANAMVSFHNLLMIALQIFGGKM---EFTGFRLLSVA 108
57889************************************************************************98777...99999****** PP
CASP_dom 92 ilDqvlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
ilD++ ++l+ +Aa Aaa +++++k+gn++a+W kiC+ f ++c++ a+a++++f++++l
VIMSS10108792 109 ILDMLNVTLISAAANAAAFMAEVGKNGNKHARWDKICDRFATYCDHGAGALIAAFAGVIL 168
********************************************************9985 PP
Or compare VIMSS10108792 to CDD or PaperBLAST