XP_021728870.1 has 193 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.5e-46 143.3 1.6 3.3e-46 142.9 1.6 1.1 1 XP_021728870.1
Domain annotation for each sequence (and alignments):
>> XP_021728870.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 142.9 1.6 3.3e-46 3.3e-46 2 151 .] 24 175 .. 23 175 .. 0.95
Alignments for each domain:
== domain 1 score: 142.9 bits; conditional E-value: 3.3e-46
CASP_dom 2 rklrlaelvLRllalvlalaaavvmatnkqtkevf....kiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfi 92
+k+r ++++LR+l l+++++a+vvm+t+kqt +v+ i+ akf+++paf+y+vva ++a +Ys++++++s +++++ + + l ++l++
XP_021728870.1 24 KKCRGIDVILRVLLLAASIVAIVVMVTSKQTATVLtprgPIRAPAKFEHSPAFIYFVVALSVAGLYSIITAIASLSFFRKSSIPPK--LFWILLV 116
68999*********************************************************************976665545555..9****** PP
CASP_dom 93 lDqvlaylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
+D++++ ++++A++Aa +v y++ kgn++++W+kiCn +gkFc+++ +++ +s++a+++
XP_021728870.1 117 HDVLILGIVAAATGAAGGVGYIGLKGNTHVKWMKICNFYGKFCRHIGGSIFVSLFAAVV 175
********************************************************985 PP
Or compare XP_021728870.1 to CDD or PaperBLAST