XP_030491486.1 has 156 amino acids
Query: CASP_dom [M=151]
Accession: PF04535.16
Description: Casparian strip membrane protein domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.4e-30 91.0 5.0 4.2e-30 90.7 5.0 1.1 1 XP_030491486.1
Domain annotation for each sequence (and alignments):
>> XP_030491486.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 90.7 5.0 4.2e-30 4.2e-30 3 151 .] 6 140 .. 4 140 .. 0.96
Alignments for each domain:
== domain 1 score: 90.7 bits; conditional E-value: 4.2e-30
CASP_dom 3 klrlaelvLRllalvlalaaavvmatnkqtkevfkiqkkakfsdlpafrylvvanaiaavYsllqlvlsvvslvrkkserskalalllfilDqvl 97
+ ++a+lvLR+l++vl l++++v+ t+++t+e+ ++ ++ +f+d+ a+ry++ ++i ++Ysllql+++++s+++ s+ ++++f +D ++
XP_030491486.1 6 ASKVASLVLRILTIVLLLISLIVLTTTSKTVETDSGDLRLRFNDIIAYRYVLFTMVIGVAYSLLQLAFTIFSVIS----GSEGNLIFDFYGDKII 96
6789*********************************************************************95....77889*********** PP
CASP_dom 98 aylllsAasAaaavvylakkgnseaqWlkiCnqfgkFcnrvaaavalsflafll 151
+y+l+++a+A ++v++ +k+ + g+F+++ a+++l flaf++
XP_030491486.1 97 SYVLATGAGAGFGVTNDMKQL----------LELGNFFEKSYASISLLFLAFIC 140
******************988..........5789*****************97 PP
Or compare XP_030491486.1 to CDD or PaperBLAST