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Align NP_001142280.1 to PF04577 (DUF563)

NP_001142280.1 has 529 amino acids

Query:       DUF563  [M=209]
Accession:   PF04577.14
Description: Protein of unknown function (DUF563)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.3e-16   45.5   0.0    8.6e-16   44.8   0.0    1.4  1  NP_001142280.1  


Domain annotation for each sequence (and alignments):
>> NP_001142280.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   44.8   0.0   8.6e-16   8.6e-16      87     177 ..     314     423 ..     223     455 .. 0.65

  Alignments for each domain:
  == domain 1  score: 44.8 bits;  conditional E-value: 8.6e-16
          DUF563  87 klrdrlrerlnlekr...................kkptrvlyisRlkagsRrilNeeevlkllpkrgfe..vvdpe.slsfeeqiklfssakviv 159
                      ++++l ++++ ++r                   ++p r+ ++sR  +g R i+N+++v++l  + gf+  +++ +  l++    +  + ++++v
  NP_001142280.1 314 DFHQMLADAYEKPPRetarpaqqqdlrdaeqrrrRRP-RLGIVSR--KGTRVIENQAAVARLASSVGFDvdILETAnGLPLSAWYASLRACDALV 405
                     6666666666666666666666666666676676888.*******..9************88888887655999666****************** PP

          DUF563 160 gphGsgltnliFmppgtt 177
                     g+hG+ lt+ +F++pg +
  NP_001142280.1 406 GVHGADLTKFLFLRPGRA 423
                     ***************844 PP



Or compare NP_001142280.1 to CDD or PaperBLAST