PaperBLAST – Find papers about a protein or its homologs

 

Align NP_001151219.1 to PF04577 (Glyco_transf_61)

NP_001151219.1 has 455 amino acids

Query:       Glyco_transf_61  [M=136]
Accession:   PF04577.18
Description: Glycosyltransferase 61
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.5e-19   55.7   0.0      8e-19   54.5   0.0    1.7  2  NP_001151219.1  


Domain annotation for each sequence (and alignments):
>> NP_001151219.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.4   0.0      0.59      0.59      66      84 ..       6      24 ..       5      34 .. 0.76
   2 !   54.5   0.0     8e-19     8e-19      38     136 .]     254     360 ..     168     360 .. 0.84

  Alignments for each domain:
  == domain 1  score: -3.4 bits;  conditional E-value: 0.59
  Glyco_transf_61 66 kksgkRrilNeeellealk 84
                     ++++ Rr+ N + ++ ++ 
   NP_001151219.1  6 GRQEPRRVGNAAMVVTMVV 24
                     5677799999999988765 PP

  == domain 2  score: 54.5 bits;  conditional E-value: 8e-19
  Glyco_transf_61  38 glaklrkllrakfnlskikp...........tryvyisRkksgkRrilNeeellealkkefggikfeivdpekl.sleeqvklfssakvivgph 119
                       +a +++llr++f l++ +            +r ++isR  +++Rr++Ne ++++a+ +    ++++i +p ++ ++   ++l++sa+v++g+h
   NP_001151219.1 254 TVADFKRLLRRAFRLERAVAsrsgaprrrdrPRLLIISR--KSSRRFVNERAMARAAAAA--RFDVRIAEPDNHtDMPNFARLVNSADVMMGVH 343
                      4555666666666676666678888888888********..89**************998..588*******999******************* PP

  Glyco_transf_61 120 GSaltnlifmppgtvvv 136
                      G++ltn++f+p  +v+v
   NP_001151219.1 344 GAGLTNMVFLPSRAVLV 360
                      **********9988765 PP



Or compare NP_001151219.1 to CDD or PaperBLAST