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Align NP_187643.1 to PF04577 (DUF563)

NP_187643.1 has 494 amino acids

Query:       DUF563  [M=209]
Accession:   PF04577.14
Description: Protein of unknown function (DUF563)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    6.2e-23   68.1   0.0    1.1e-22   67.3   0.0    1.4  1  NP_187643.1  


Domain annotation for each sequence (and alignments):
>> NP_187643.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   67.3   0.0   1.1e-22   1.1e-22       3     204 ..     199     429 ..     197     431 .. 0.67

  Alignments for each domain:
  == domain 1  score: 67.3 bits;  conditional E-value: 1.1e-22
       DUF563   3 ygHwlvdvlprlllleqlvlddddrilvpalaspqpfqrell.kllgi.rpekrikveld.epvhveklivpvpprssggfqgallp........... 86 
                   +H + d l +l+++++ ++++   ++v a    +++ +  + ++l + +  + i+  +d ++++++++iv    ++    +++  +           
  NP_187643.1 199 LYHEFNDGLIPLYITSKRFNKKV--VFVIA--EYHKWWEMKYgDVLSQlSDYSLIDFNKDkRTHCFKEAIVGLRIHGELTVDPSQMQddgttinefrn 292
                  45888888888888888888888..33333..455555533345555547777777776634455555555555553333333333355555565555 PP

       DUF563  87 ...................klrdrlrerlnlekrkkptrvlyisRlkagsRrilNeeevlkllpkrgfe..vvdpe.slsfeeqiklfssakvivgph 162
                                     ++++rl +r +    k+p ++  +sR  +gsR i+Ne+ ++k  +++gf+  v++p+ +  +++  ++ +s+kv+vg+h
  NP_187643.1 293 vldrayrprinrldrleeqRFHARLAQRRKA---KRP-KLALFSR--TGSRGITNEDLMVKMAQRIGFDieVLRPDrTTELAKIYRVLNSSKVMVGVH 384
                  4444444444445444444444444444444...558.999****..*****************9998766888998999****************** PP

       DUF563 163 GsgltnliFmppgttvielvppnrldns....fenlaallglkyay 204
                  G+++t+ +Fm+pg+  i ++p +  d+     + + a+ lgl+y +
  NP_187643.1 385 GAAMTHFLFMKPGSIFIQIIPLG-TDWAaetyYGEPAKKLGLDYNG 429
                  *******************6654.4443466688888888888866 PP



Or compare NP_187643.1 to CDD or PaperBLAST