PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::Q6Z7I3 to PF04577 (Glyco_transf_61)

SwissProt::Q6Z7I3 has 566 amino acids

Query:       Glyco_transf_61  [M=136]
Accession:   PF04577.18
Description: Glycosyltransferase 61
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    1.4e-18   53.7   0.0    2.6e-18   52.8   0.0    1.4  1  SwissProt::Q6Z7I3  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q6Z7I3  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   52.8   0.0   2.6e-18   2.6e-18       1     136 []     282     473 ..     282     473 .. 0.77

  Alignments for each domain:
  == domain 1  score: 52.8 bits;  conditional E-value: 2.6e-18
    Glyco_transf_61   1 ygHflldflprlvlvp.....................................................vfaerlivpssprphhglvglgl 39 
                        ++H ++d + +l+l+                                                      ++ + li++ +p   ++  ++  
  SwissProt::Q6Z7I3 282 FFHDMTDAMIPLFLTTahlkgevqilitnykpwwvqkytpllrklsnydvinfdedagvhcfpqgylglYRDRDLIISPHPT--RNPRNYTM 371
                        7888888888885554777777777777777778888888888888888888888888888888888866666666644333..33333344 PP

    Glyco_transf_61  40 aklrkllrakfnlskikp..........tryvyisRkksgkRrilNeeellealkkefggikfeivdpekl.sleeqvklfssakvivgphG 120
                          ++++lr++++l + +p          +r ++isR  +g R++lN ee+++a+ +  g   f +   e   ++ + ++l++sa+v+ ++hG
  SwissProt::Q6Z7I3 372 VDYNRFLRDALELRRDRPsvlgeepgmrPRMLIISR--AGTRKLLNLEEVAAAATEL-G---FNVTVAEAGaDVPAFAALVNSADVLLAVHG 457
                        4455556666666667778888999***********..9******************.8...6666555555******************** PP

    Glyco_transf_61 121 Saltnlifmppgtvvv 136
                        ++ltn if+p ++vvv
  SwissProt::Q6Z7I3 458 AGLTNQIFLPAEAVVV 473
                        ************9997 PP



Or compare SwissProt::Q6Z7I3 to CDD or PaperBLAST