PaperBLAST – Find papers about a protein or its homologs

 

Align XP_008775935.1 to PF04577 (Glyco_transf_61)

XP_008775935.1 has 484 amino acids

Query:       Glyco_transf_61  [M=136]
Accession:   PF04577.18
Description: Glycosyltransferase 61
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.6e-18   51.5   0.0    1.2e-17   50.7   0.0    1.5  1  XP_008775935.1  


Domain annotation for each sequence (and alignments):
>> XP_008775935.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   50.7   0.0   1.2e-17   1.2e-17      41     136 .]     282     386 ..     189     386 .. 0.70

  Alignments for each domain:
  == domain 1  score: 50.7 bits;  conditional E-value: 1.2e-17
  Glyco_transf_61  41 klrkllrakfnlskikp............tryvyisRkksgkRrilNeeellealkkefggikfeivdpekl.sleeqvklfssakvivgphGS 121
                       +++ lr+++ l++               +r +++sR  ++ R++lNe  +++++    g ++++i +p  +  +++ ++l++sa+v++g+hG+
   XP_008775935.1 282 DFKAMLREALGLERATAappedewdirrrPRLLILSR--QKTRKFLNERGMADMAMSL-G-FDVRIGQPDIStEVAKFARLVNSADVMIGVHGA 371
                      23333333333333333556788889999********..999***************9.5.**********999******************** PP

  Glyco_transf_61 122 altnlifmppgtvvv 136
                      +ltn++f+p g+v++
   XP_008775935.1 372 GLTNMVFLPAGAVII 386
                      ***********9997 PP



Or compare XP_008775935.1 to CDD or PaperBLAST