PaperBLAST – Find papers about a protein or its homologs

 

Align A0CDD4 to PF05018 (CFA20_dom)

A0CDD4 has 191 amino acids

Query:       CFA20_dom  [M=185]
Accession:   PF05018.17
Description: CFA20 domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.1e-98  313.6   1.0    2.4e-98  313.4   1.0    1.0  1  A0CDD4    


Domain annotation for each sequence (and alignments):
>> A0CDD4  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  313.4   1.0   2.4e-98   2.4e-98       1     184 [.       1     184 [.       1     185 [. 0.99

  Alignments for each domain:
  == domain 1  score: 313.4 bits;  conditional E-value: 2.4e-98
  CFA20_dom   1 mfknafqsgflsilksigskplkiwekkvknGevkrvlDeeikskvleieganvattyitcPaepkqsLgiklpfLvllvknlkkyFsfevqilddknvr 100
                mfkn+fqsgflsil+sigskpl+iw+k++knG++kr++D++i+s+vlei+g+nv+t++it+Pa+pk++LgiklpfLv+++knlkkyF+fevq+lddknvr
     A0CDD4   1 MFKNSFQSGFLSILYSIGSKPLQIWDKQIKNGHIKRITDQDIQSSVLEIMGTNVSTNFITAPADPKETLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVR 100
                9*************************************************************************************************** PP

  CFA20_dom 101 rrlrvsnfqketkvkplivtlPlkleegWnqlqlnLaeltrraygtnyvetkrvqihancrlrrvYfsdrlYsedelpaefrlv 184
                rr+r+sn+q++t+vkp+i+t+P++l+egWnq+q+nL+++trraygtny+et rvqihancr+rr+YfsdrlYse+elp ef+l+
     A0CDD4 101 RRFRASNYQSTTRVKPFICTMPMRLDEGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRIYFSDRLYSEEELPPEFKLF 184
                **********************************************************************************97 PP



Or compare A0CDD4 to CDD or PaperBLAST