PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS10102319 to PF05057 (DUF676)

VIMSS10102319 has 418 amino acids

Query:       DUF676  [M=217]
Accession:   PF05057.18
Description: Putative serine esterase (DUF676)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.3e-79  252.8   0.0    1.9e-79  252.2   0.0    1.2  1  VIMSS10102319  


Domain annotation for each sequence (and alignments):
>> VIMSS10102319  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  252.2   0.0   1.9e-79   1.9e-79       2     212 ..      89     310 ..      88     315 .. 0.96

  Alignments for each domain:
  == domain 1  score: 252.2 bits;  conditional E-value: 1.9e-79
         DUF676   2 skkdhLvVlvHGlegnsadleyvkeqlekkeklpdelivvlmsennesktfkgidvlgerlaeevlevvkkkkdkikkiSfvghSlGgliaryaig 97 
                    +k+dhLvV+v+G+ g++ad++y +eq++k  k+pd+++v+++++n+++ tf+g+d +gerla+evl vvk+++   kkiSfv+hSlGgl+aryaig
  VIMSS10102319  89 EKPDHLVVMVNGIVGSAADWKYAAEQFVK--KFPDKVLVHRSESNSATLTFDGVDKMGERLANEVLGVVKHRSGL-KKISFVAHSLGGLVARYAIG 181
                    689**************************..******************************************99.9******************* PP

         DUF676  98 klkekkm...........t..lkglikglepvtFitlasPhLGvlgekpl.inlglalleklkkslsmkqlgktGreLflkdekdkkkslllkllk 179
                    kl+e++            +  + g i+glep++Fit+a+PhLG++g++++ i++gl++le++++++++ + g+tG++Lfl+d++d++ +ll+++++
  VIMSS10102319 182 KLYEQPGevdsldspskeKsaRGGEIAGLEPMNFITFATPHLGSRGHRQFpILCGLPFLERTASQTAHLAAGRTGKHLFLVDNDDGNAPLLIRMAT 277
                    ***999999998887765156899************************************************************************ PP

         DUF676 180 desdlkliealkaFkrrvlyanvvndrivplks 212
                    d++dlk+i+al+aFkrrv+yanv  d++v  ++
  VIMSS10102319 278 DSDDLKFISALNAFKRRVAYANVNFDSMVGWRT 310
                    ***********************9999998877 PP



Or compare VIMSS10102319 to CDD or PaperBLAST